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Bioedit Company clustalw multiple sequence alignment program
Clustalw Multiple Sequence Alignment Program, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustalw+multiple+sequence+alignment+programs/clustalw+multiple+alignment/pmc11387592__mmc1-31-23-29
Average 90 stars, based on 1 article reviews
clustalw multiple sequence alignment program - by Bioz Stars, 2026-11
90/100 stars

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other:

Article Title: Influence of Age of Infection on the Gut Microbiota in Worker Honey Bees ( Apis mellifera iberiensis ) Experimentally Infected with Nosema ceranae .
Article Snippet: The 16S rRNA gene sequences of Bo. apis, as well as Parasaccharibacter apium and Saccharibacter floricola that were both recently reclassified as Bo. apis [61], were obtained from GenBank (NCBI; Table S1) and aligned using ClustalW Multiple Alignment software (BioEdit Sequence Alignment Editor 7.2.6.1).

Article Title: The First Virome of a Russian Vineyard.
Article Snippet: Multiple sequence alignment was performed using the ClustalW method in BioEdit Sequence Alignment Editor v. 7.2.0 software [34].

Article Title: Innovative nucleic acid detection of Clostridioides difficile utilizing the PAM-unconventional, one-step LAMP/CRISPR-Cas12b detection platforms
Article Snippet: To check sequence conservation within the primer design regions, ClustalW multiple sequence alignment (Bioedit Sequence Alignment Editor software, v.7.2.5) was performed on tcdA and tcdB sequences retrieved from the National Center for Biotechnology Information (NCBI) nucleotide database.

Sequencing:

Article Title: Natural genetic diversity of the DBL domain of a novel member of the Plasmodium vivax erythrocyte binding-like proteins (EBP2) in the Amazon rainforest.
Article Snippet: The PCR products were purified with the ExoSAP-IT® PCR Product Cleanup (Affymetrix, USB), and 1 μL was used in the sequencing reaction by the Sanger method (Sanger et al., 1977), with the BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems - Life Technologies) in an ABI 3730xL DNA analyzer (Applied Biosystems). .. DBPII and EBP2-II sequences were aligned using the ClustalW multiple alignment algorithm in BioEdit 7.7.1 Sequence Alignment software (Hall, 1999) to identify the single nucleotide polymorphisms (SNPs). ..

Article Title: Natural genetic diversity of the DBL domain of a novel member of the Plasmodium vivax erythrocyte binding-like proteins (EBP2) in the Amazon rainforest
Article Snippet: The PCR products were purified with the ExoSAP-IT ® PCR Product Cleanup (Affymetrix, USB), and 1 μL was used in the sequencing reaction by the Sanger method , with the BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems - Life Technologies) in an ABI 3730xL DNA analyzer (Applied Biosystems). .. DBPII and EBP2-II sequences were aligned using the ClustalW multiple alignment algorithm in BioEdit 7.7.1 Sequence Alignment software ( ) to identify the single nucleotide polymorphisms (SNPs). .. The quality and reliability of polymorphic positions were evaluated based on the electropherograms of each sequence in the Chromas 2.4 software (Technelysium©).

Article Title: Cordycepin exhibits both antiviral and anti-inflammatory effects against dengue virus infection
Article Snippet: .. NS5 protein sequence alignment of four DENV serotypes and other flaviviruses (west nile virus, zika virus yellow fever virus) was conducted using the ClustalW multiple sequence alignment program of BioEdit software (Informer Technologies, Inc). ..

Article Title: Genomic characterization of recombinant cucumber mosaic virus isolates infecting mustard species via HTS in India
Article Snippet: Mustard belonging to the family Brassicaceae is not only an essential source of edible oil in India but also a condiment and vegetable leaf source.. After soybean, mustard is India's second most significant oilseed crop.. There are three major varieties of mustard: yellow mustard (Brassica rapa subsp. trilocularis), thought to have Mediterranean origin; brown mustard, sometimes known as Indian mustard (Brassica juncea); and black mustard (B. nigra), thought to have Asia MinorIran origin.

Software:

Article Title: Natural genetic diversity of the DBL domain of a novel member of the Plasmodium vivax erythrocyte binding-like proteins (EBP2) in the Amazon rainforest.
Article Snippet: The PCR products were purified with the ExoSAP-IT® PCR Product Cleanup (Affymetrix, USB), and 1 μL was used in the sequencing reaction by the Sanger method (Sanger et al., 1977), with the BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems - Life Technologies) in an ABI 3730xL DNA analyzer (Applied Biosystems). .. DBPII and EBP2-II sequences were aligned using the ClustalW multiple alignment algorithm in BioEdit 7.7.1 Sequence Alignment software (Hall, 1999) to identify the single nucleotide polymorphisms (SNPs). ..

Article Title: Natural genetic diversity of the DBL domain of a novel member of the Plasmodium vivax erythrocyte binding-like proteins (EBP2) in the Amazon rainforest
Article Snippet: The PCR products were purified with the ExoSAP-IT ® PCR Product Cleanup (Affymetrix, USB), and 1 μL was used in the sequencing reaction by the Sanger method , with the BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems - Life Technologies) in an ABI 3730xL DNA analyzer (Applied Biosystems). .. DBPII and EBP2-II sequences were aligned using the ClustalW multiple alignment algorithm in BioEdit 7.7.1 Sequence Alignment software ( ) to identify the single nucleotide polymorphisms (SNPs). .. The quality and reliability of polymorphic positions were evaluated based on the electropherograms of each sequence in the Chromas 2.4 software (Technelysium©).

Article Title: Genomic characterization of recombinant cucumber mosaic virus isolates infecting mustard species via HTS in India
Article Snippet: Mustard belonging to the family Brassicaceae is not only an essential source of edible oil in India but also a condiment and vegetable leaf source.. After soybean, mustard is India's second most significant oilseed crop.. There are three major varieties of mustard: yellow mustard (Brassica rapa subsp. trilocularis), thought to have Mediterranean origin; brown mustard, sometimes known as Indian mustard (Brassica juncea); and black mustard (B. nigra), thought to have Asia MinorIran origin.

Virus:

Article Title: Cordycepin exhibits both antiviral and anti-inflammatory effects against dengue virus infection
Article Snippet: .. NS5 protein sequence alignment of four DENV serotypes and other flaviviruses (west nile virus, zika virus yellow fever virus) was conducted using the ClustalW multiple sequence alignment program of BioEdit software (Informer Technologies, Inc). ..



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